Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Locomotion (GO:0040011) Genes Targeted by hsa-mir-454 in B-CLL Leukemia Haslinger Cluster 10 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 10. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-454 GO:0040011 11009 IL24 interleukin 24 [Source:HGNC Symbol;Acc:11346] zzz999 5225 PGC progastricsin (pepsinogen C) [Source:HGNC Symbol;Acc:8890] zzz999 1641 DCX doublecortin [Source:HGNC Symbol;Acc:2714] zzz999 Yes 5137 PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa [Source:HGNC Symbol;Acc:8776] P 10544 PROCR protein C receptor, endothelial [Source:HGNC Symbol;Acc:9452] zzz999 5727 PTCH1 patched 1 [Source:HGNC Symbol;Acc:9585] zzz999 1288 COL4A6 collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:2208] zzz999 5617 PRL prolactin [Source:HGNC Symbol;Acc:9445] zzz999 8539 API5 apoptosis inhibitor 5 [Source:HGNC Symbol;Acc:594] P T 1237 CCR8 chemokine (C-C motif) receptor 8 [Source:HGNC Symbol;Acc:1609] zzz999 Yes 116987 AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:16922] zzz999 223117 SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:HGNC Symbol;Acc:10726] zzz999 3082 HGF hepatocyte growth factor (hepapoietin A; scatter factor) [Source:HGNC Symbol;Acc:4893] zzz999 10677 AVIL advillin [Source:HGNC Symbol;Acc:14188] zzz999 1293 COL6A3 collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213] zzz999 Yes 8476 CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) [Source:HGNC Symbol;Acc:1737] zzz999 9825 SPATA2 spermatogenesis associated 2 [Source:HGNC Symbol;Acc:14681] T 9742 IFT140 intraflagellar transport 140 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29077] zzz999 1122 CHML choroideremia-like (Rab escort protein 2) [Source:HGNC Symbol;Acc:1941] zzz999 6318 SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 [Source:HGNC Symbol;Acc:10570] zzz999 6317 SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 [Source:HGNC Symbol;Acc:10569] zzz999 9890 zzz999 Lipid phosphate phosphatase-related protein type 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z2D5] zzz999 2986 GUCY2F guanylate cyclase 2F, retinal [Source:HGNC Symbol;Acc:4691] zzz999 3605 IL17A interleukin 17A [Source:HGNC Symbol;Acc:5981] zzz999 5818 PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) [Source:HGNC Symbol;Acc:9706] zzz999 Yes 9180 OSMR oncostatin M receptor [Source:HGNC Symbol;Acc:8507] zzz999 4837 NNMT nicotinamide N-methyltransferase [Source:HGNC Symbol;Acc:7861] zzz999 5375 PMP2 peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117] zzz999 1382 CRABP2 cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:2339] zzz999 2730 GCLM glutamate-cysteine ligase, modifier subunit [Source:HGNC Symbol;Acc:4312] zzz999 6262 RYR2 ryanodine receptor 2 (cardiac) [Source:HGNC Symbol;Acc:10484] T 8453 CUL2 cullin 2 [Source:HGNC Symbol;Acc:2552] zzz999 1500 CTNND1 catenin (cadherin-associated protein), delta 1 [Source:HGNC Symbol;Acc:2515] zzz999 4291 MLF1 myeloid leukemia factor 1 [Source:HGNC Symbol;Acc:7125] zzz999 2904 GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B [Source:HGNC Symbol;Acc:4586] zzz999 220 ALDH1A3 aldehyde dehydrogenase 1 family, member A3 [Source:HGNC Symbol;Acc:409] zzz999 412 STS steroid sulfatase (microsomal), isozyme S [Source:HGNC Symbol;Acc:11425] zzz999 3950 LECT2 leukocyte cell-derived chemotaxin 2 [Source:HGNC Symbol;Acc:6550] zzz999 Yes 5557 PRIM1 primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369] zzz999 23541 SEC14L2 SEC14-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:10699] zzz999 2674 GFRA1 GDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:4243] zzz999 Yes 2825 GPR1 G protein-coupled receptor 1 [Source:HGNC Symbol;Acc:4463] zzz999 92104 TTC30A tetratricopeptide repeat domain 30A [Source:HGNC Symbol;Acc:25853] zzz999 57591 MKL1 megakaryoblastic leukemia (translocation) 1 [Source:HGNC Symbol;Acc:14334] zzz999 55534 MAML3 mastermind-like 3 (Drosophila) [Source:HGNC Symbol;Acc:16272] P T 26095 PTPN20A protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422] T 5874 RAB27B RAB27B, member RAS oncogene family [Source:HGNC Symbol;Acc:9767] zzz999 1084 CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3 [Source:HGNC Symbol;Acc:1815] zzz999 25833 POU2F3 POU class 2 homeobox 3 [Source:HGNC Symbol;Acc:19864] zzz999 10085 EDIL3 EGF-like repeats and discoidin I-like domains 3 [Source:HGNC Symbol;Acc:3173] zzz999 5136 PDE1A phosphodiesterase 1A, calmodulin-dependent [Source:HGNC Symbol;Acc:8774] zzz999 4359 MPZ myelin protein zero [Source:HGNC Symbol;Acc:7225] zzz999 4763 NF1 neurofibromin 1 [Source:HGNC Symbol;Acc:7765] zzz999 Yes 1187 CLCNKA chloride channel Ka [Source:HGNC Symbol;Acc:2026] zzz999 4017 LOXL2 lysyl oxidase-like 2 [Source:HGNC Symbol;Acc:6666] zzz999 4193 MDM2 Mdm2 p53 binding protein homolog (mouse) [Source:HGNC Symbol;Acc:6973] zzz999 2304 FOXE1 forkhead box E1 (thyroid transcription factor 2) [Source:HGNC Symbol;Acc:3806] zzz999 Yes 55970 GNG12 guanine nucleotide binding protein (G protein), gamma 12 [Source:HGNC Symbol;Acc:19663] zzz999 9087 TMSB4Y thymosin beta 4, Y-linked [Source:HGNC Symbol;Acc:11882] zzz999 3485 IGFBP2 insulin-like growth factor binding protein 2, 36kDa [Source:HGNC Symbol;Acc:5471] zzz999 4904 YBX1 Y box binding protein 1 [Source:HGNC Symbol;Acc:8014] zzz999 3985 LIMK2 LIM domain kinase 2 [Source:HGNC Symbol;Acc:6614] zzz999 2018 EMX2 empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:3341] P Yes 202559 KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2 [Source:HGNC Symbol;Acc:18114] zzz999 5367 PMCH pro-melanin-concentrating hormone [Source:HGNC Symbol;Acc:9109] zzz999 5897 RAG2 recombination activating gene 2 [Source:HGNC Symbol;Acc:9832] zzz999 5414 SEPT4 septin 4 [Source:HGNC Symbol;Acc:9165] zzz999 27346 TMEM97 transmembrane protein 97 [Source:HGNC Symbol;Acc:28106] zzz999 2078 ERG v-ets erythroblastosis virus E26 oncogene homolog (avian) [Source:HGNC Symbol;Acc:3446] P T 10787 NCKAP1 NCK-associated protein 1 [Source:HGNC Symbol;Acc:7666] zzz999 10630 PDPN podoplanin [Source:HGNC Symbol;Acc:29602] zzz999 Yes 8973 CHRNA6 cholinergic receptor, nicotinic, alpha 6 [Source:HGNC Symbol;Acc:15963] zzz999 5332 PLCB4 phospholipase C, beta 4 [Source:HGNC Symbol;Acc:9059] T 7220 TRPC1 transient receptor potential cation channel, subfamily C, member 1 [Source:HGNC Symbol;Acc:12333] zzz999 Yes 9856 KIAA0319 KIAA0319 [Source:HGNC Symbol;Acc:21580] zzz999 Yes 357 SHROOM2 shroom family member 2 [Source:HGNC Symbol;Acc:630] zzz999 Yes 7554 ZNF8 zinc finger protein 8 [Source:HGNC Symbol;Acc:13154] zzz999 6750 SST somatostatin [Source:HGNC Symbol;Acc:11329] zzz999 Yes 10551 AGR2 anterior gradient homolog 2 (Xenopus laevis) [Source:HGNC Symbol;Acc:328] zzz999 26038 CHD5 chromodomain helicase DNA binding protein 5 [Source:HGNC Symbol;Acc:16816] P 27255 CNTN6 contactin 6 [Source:HGNC Symbol;Acc:2176] zzz999 Yes 2004 ELK3 ELK3, ETS-domain protein (SRF accessory protein 2) [Source:HGNC Symbol;Acc:3325] P 6346 CCL1 chemokine (C-C motif) ligand 1 [Source:HGNC Symbol;Acc:10609] T Yes 5347 PLK1 polo-like kinase 1 [Source:HGNC Symbol;Acc:9077] zzz999 7020 TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) [Source:HGNC Symbol;Acc:11742] zzz999 8633 UNC5C unc-5 homolog C (C. elegans) [Source:HGNC Symbol;Acc:12569] zzz999 Yes 9863 MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 [Source:HGNC Symbol;Acc:18957] P 3579 CXCR2 chemokine (C-X-C motif) receptor 2 [Source:HGNC Symbol;Acc:6027] zzz999 Yes 11104 KATNA1 katanin p60 (ATPase containing) subunit A 1 [Source:HGNC Symbol;Acc:6216] zzz999 Yes 152789 JAKMIP1 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:26460] P T 1388 ATF6B activating transcription factor 6 beta [Source:HGNC Symbol;Acc:2349] zzz999 10371 SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:HGNC Symbol;Acc:10723] zzz999 Yes 6476 SI sucrase-isomaltase (alpha-glucosidase) [Source:HGNC Symbol;Acc:10856] zzz999 5612 PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440] zzz999 5789 PTPRD protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668] P T 270 AMPD1 adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:468] zzz999

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